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1.
Zootaxa ; 4966(1): 8490, 2021 Apr 30.
Artículo en Inglés | MEDLINE | ID: mdl-34186631

RESUMEN

Tanytarsus is a highly diverse genus of Chironomidae (Diptera), distributed worldwide. In the Neotropics, 84 species are known, but only five have been recorded from Central America to date. In the present article, two new species of the Tanytarsus ortoni species group are described and illustrated based on male specimens collected from Costa Rica, T. braini sp. nov. and T. costarica sp. nov.


Asunto(s)
Chironomidae/clasificación , Animales , Costa Rica , Masculino
2.
Zootaxa ; 4990(1): 81-103, 2021 Jun 18.
Artículo en Inglés | MEDLINE | ID: mdl-34186772

RESUMEN

Two Monodiamesa species collected in all stages and both sexes from the Tibetan Plateau are erected as M. secunditibetica Han and Tang, sp. n. and M. bonalpicola Han and Tang, sp. n. Molecular analysis of barcodes (COI-5P) for some related known species confirms the species validity and allows inference of internal relationships. Detailed description, habitat ecology and geographical information of two new species are provided. Additionally, brief comments on some known eastern Palaearctic species of Monodiamesa are made to give insights on further study.


Asunto(s)
Chironomidae/clasificación , Animales , Código de Barras del ADN Taxonómico , Ecosistema , Femenino , Masculino , Tibet
4.
Zootaxa ; 4970(2): 385390, 2021 May 14.
Artículo en Inglés | MEDLINE | ID: mdl-34186888

RESUMEN

A new species, Stenochironomus zhengi Lin Liu sp. nov., is described and illustrated as adult males. An updated key to males of Stenochironomus from China is presented.


Asunto(s)
Chironomidae/clasificación , Animales , China , Masculino , Parques Recreativos
5.
Zootaxa ; 4980(2): 383388, 2021 Jun 01.
Artículo en Inglés | MEDLINE | ID: mdl-34186974

RESUMEN

The genus Monopelopia Fittkau, 1962 is newly recorded from Oriental China. Monopelopia zhengi Lin sp. n., is described and illustrated based on an adult male from Jianfengling National Nature Reserve, Hainan, China. In addition, an updated key to adult males of Monopelopia is provided.


Asunto(s)
Chironomidae/clasificación , Animales , China , Masculino
6.
Zootaxa ; 4951(3): zootaxa.4951.3.8, 2021 Apr 07.
Artículo en Inglés | MEDLINE | ID: mdl-33903395

RESUMEN

Chironomids of the genus Pagastia Oliver (Diamesinae, Diamesini) from the mountains of Central Asia are revised using both morphological characters and molecular data. Illustrated descriptions of the adult male Pagastia (P.) caelestomontana sp. nov. from Kirgizstan and Tajikistan, P. (P.) hanseni sp. nov. from Tajikistan, and record of a finding apparently a new species P. (P.) aff. lanceolata (Tokunaga) from Tajikistan as well as an updated a key to the determination of the adult males of all known species of Pagastia are provided. A phylogenetic framework is reconstructed based on two mitochondrial genes cytochrome oxidase subunit I (COI) sequences of 34 samples belonging to 7 species of the genus Pagastia and cytochrome oxidase subunit II (COII) available for most samples. Phylogenetic trees of some known species of the genus Pagastia were reconstructed using the combined dataset and Bayesian inference (BI) and Maximum Likelihood (ML) methods. The interspecific K2P distances between seven Pagastia species including P. (P.) caelestomontana sp. nov., P. (P.) hanseni sp. nov. and undescribed P. (P.) aff. lanceolata (Tokunaga) are 6.3-13.2 which corresponding to species level.


Asunto(s)
Chironomidae , Animales , Teorema de Bayes , Chironomidae/clasificación , Chironomidae/genética , Código de Barras del ADN Taxonómico , Dípteros , Masculino , Filogenia
7.
Genome ; 64(3): 242-252, 2021 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-32510236

RESUMEN

DNA barcodes are widely used for species identification and biogeographic studies. Here, we compare the use of full mitochondrial genomes versus DNA barcodes and other mitochondrial DNA fragments for biogeographic and ecological analyses. Our dataset comprised 120 mitochondrial genomes from the genus Clunio (Diptera: Chironomidae), comprising five populations from two closely related species (Clunio marinus and Clunio balticus) and three ecotypes. We extracted cytochrome oxidase c subunit I (COI) barcodes and partitioned the mitochondrial genomes into non-overlapping windows of 750 or 1500 bp. Haplotype networks and diversity indices were compared for these windows and full mitochondrial genomes (15.4 kb). Full mitochondrial genomes indicate complete geographic isolation between populations, but do not allow for conclusions on the separation of ecotypes or species. COI barcodes have comparatively few polymorphisms, ideal for species identification, but do not resolve geographic isolation. Many of the similarly sized 750 bp windows have higher nucleotide and haplotype diversity than COI barcodes, but still do not resolve biogeography. Only when increasing the window size to 1500 bp, two windows resolve biogeography reasonably well. Our results suggest that the design and use of DNA barcodes in biogeographic studies must be carefully evaluated for each investigated species.


Asunto(s)
Chironomidae/clasificación , Código de Barras del ADN Taxonómico , Animales , Chironomidae/genética , Complejo IV de Transporte de Electrones/genética , Europa (Continente) , Genoma Mitocondrial , Haplotipos , Filogeografía
8.
Environ Monit Assess ; 191(7): 408, 2019 Jun 04.
Artículo en Inglés | MEDLINE | ID: mdl-31165275

RESUMEN

Pollution of rivers and streams, by anthropic action, is characterized as an environmental, social, and sanitary problem. Factors such as the association between the marginal vegetation, the distribution of the substrates in the riverbed, and the availability of allochthonous organic matter influence the distribution and composition of the aquatic entomofauna. The objective of this study was to analyze the structure of aquatic insect communities in a pasture stream in northern Paraná, southern Brazil, with emphasis on the groups of indicators of good water quality, thus inferring the conditions of its preservation. Samples were collected from July to October in three parts of the stream (P1, P2, and P3), where the insect faune was collected with the aid of a sieve in the foliage substrate and washing of rocks and decomposing pieces of wood. A total of 1323 individuals were collected, being Chironomidae (Diptera) the most abundant taxon. The analysis of the biotic indices (EPT/Chironomidae, IBF, BMWP, and BMWP/ASPT) and diversity indicated better preservation conditions at points P1 and P3 where the riparian forest was well preserved, with less exposure to the stream bed. In P2, the entomofauna presented less diversity and the biotic indexes indicated loss of water quality, showing the impacts of changes in the marginal vegetation of this section. In a generally preserved aquatic environment, small changes in its vegetation are sufficient to cause an imbalance in the aquatic insect community, showing the efficiency of these organisms as bio-indicators and the sensitivity of biotic indexes.


Asunto(s)
Organismos Acuáticos/clasificación , Chironomidae/clasificación , Monitoreo del Ambiente/métodos , Animales , Biodiversidad , Brasil , Ecosistema , Insectos/clasificación , Ríos/química , Calidad del Agua
9.
Mol Ecol Resour ; 19(4): 900-928, 2019 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-30977972

RESUMEN

This study summarizes results of a DNA barcoding campaign on German Diptera, involving analysis of 45,040 specimens. The resultant DNA barcode library includes records for 2,453 named species comprising a total of 5,200 barcode index numbers (BINs), including 2,700 COI haplotype clusters without species-level assignment, so called "dark taxa." Overall, 88 out of 117 families (75%) recorded from Germany were covered, representing more than 50% of the 9,544 known species of German Diptera. Until now, most of these families, especially the most diverse, have been taxonomically inaccessible. By contrast, within a few years this study provided an intermediate taxonomic system for half of the German Dipteran fauna, which will provide a useful foundation for subsequent detailed, integrative taxonomic studies. Using DNA extracts derived from bulk collections made by Malaise traps, we further demonstrate that species delineation using BINs and operational taxonomic units (OTUs) constitutes an effective method for biodiversity studies using DNA metabarcoding. As the reference libraries continue to grow, and gaps in the species catalogue are filled, BIN lists assembled by metabarcoding will provide greater taxonomic resolution. The present study has three main goals: (a) to provide a DNA barcode library for 5,200 BINs of Diptera; (b) to demonstrate, based on the example of bulk extractions from a Malaise trap experiment, that DNA barcode clusters, labelled with globally unique identifiers (such as OTUs and/or BINs), provide a pragmatic, accurate solution to the "taxonomic impediment"; and (c) to demonstrate that interim names based on BINs and OTUs obtained through metabarcoding provide an effective method for studies on species-rich groups that are usually neglected in biodiversity research projects because of their unresolved taxonomy.


Asunto(s)
Ceratopogonidae/clasificación , Ceratopogonidae/genética , Chironomidae/clasificación , Chironomidae/genética , Código de Barras del ADN Taxonómico , Dípteros/clasificación , Dípteros/genética , Animales , Seguimiento de Parámetros Ecológicos/métodos , Alemania
10.
Environ Sci Pollut Res Int ; 26(8): 8087-8097, 2019 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-30685862

RESUMEN

The objective of the present study was to investigate the responses of the chironomid communities (Diptera: Chironomidae) to environmental variables in four moderately and highly disturbed rivers located in one of the most degraded watersheds in South America. Sampling campaigns were carried out during 2014-2016 in four sites of the Matanza-Riachuelo basin. The physical-chemical and hydrological variables were measured and, the ecological indices were calculated and evaluated by ANOVA. The responses of Chironomidae to the environmental variables were evaluated by redundancy analysis (RDA), and the sampling sites were grouped according to the populations of chironomids and the main environmental variables. Finally, the Spearman correlation was made to determine which of these variables were significant. In total, 13 chironomid taxa were found in 36 samples during the study period. The greatest density registered belongs to Rheotanytarsus and Cricotopus. The ANOVA detected the greatest Chironomidae density and taxonomic richness in the sites with agricultural-urban impact. The changes in the distribution of Rheotanytarsus, Thienemanniella, and Polypedilum were mainly explained by the increase in current velocity, organic matter, and hardness, and the decrease of NH3 and BOD. On the other hand, Goeldichironomus, Chironomus, Parachironomus, Dicrotendipes, and Cricotopus were explained by the increase in conductivity, dissolved oxygen, and temperature, and the decrease of the variables NO3, BOD, and Cu. In addition to this, the sites with urban-agricultural impact were clearly separated from sites with urban-industrial impact. The last one was more related to the increase in BOD, Cu, and NO3 that indicates moderate to poor water quality. In conclusion, we can infer that the physical and chemical variables are correlated with changes in the structure and distribution of the chironomid community and there are genera that respond differently at high and intermediate situations of disturbances. This knowledge contributes to the execution of strategies for the conservation and restoration of the lotic ecosystems.


Asunto(s)
Chironomidae/crecimiento & desarrollo , Monitoreo del Ambiente/métodos , Ríos/química , Contaminación del Agua/efectos adversos , Calidad del Agua , Animales , Argentina , Biodiversidad , Chironomidae/clasificación , Dinámica Poblacional , América del Sur , Temperatura , Contaminación del Agua/análisis
11.
Mol Ecol ; 28(2): 307-317, 2019 01.
Artículo en Inglés | MEDLINE | ID: mdl-30084518

RESUMEN

Terrestrial predators on marine shores benefit from the inflow of organisms and matter from the marine ecosystem, often causing very high predator densities and indirectly affecting the abundance of other prey species on shores. This indirect effect may be particularly strong if predators shift diets between seasons. We therefore quantified the seasonal variation in diet of two wolf spider species that dominate the shoreline predator community, using molecular gut content analyses with general primers to detect the full prey range. Across the season, spider diets changed, with predominantly terrestrial prey from May until July and predominantly marine prey (mainly chironomids) from August until October. This pattern coincided with a change in the spider age and size structure, and prey abundance data and resource selection analyses suggest that the higher consumption of chironomids during autumn is due to an ontogenetic diet shift rather than to variation in prey abundance. The analyses suggested that small dipterans with a weak flight capacity, such as Chironomidae, Sphaeroceridae, Scatopsidae and Ephydridae, were overrepresented in the gut of small juvenile spiders during autumn, whereas larger, more robust prey, such as Lepidoptera, Anthomyidae and Dolichopodidae, were overrepresented in the diet of adult spiders during spring. The effect of the inflow may be that the survival and growth of juvenile spiders is higher in areas with high chironomid abundances, leading to higher densities of adult spiders and higher predation rates on the terrestrial prey next spring.


Asunto(s)
Ecosistema , Cadena Alimentaria , Arañas/fisiología , Animales , Chironomidae/clasificación , Chironomidae/genética , Dieta , Contenido Digestivo/química , Conducta Predatoria/fisiología , Arañas/genética
12.
Zoolog Sci ; 35(6): 514-520, 2018 12 04.
Artículo en Inglés | MEDLINE | ID: mdl-30520356

RESUMEN

Although epibiont ciliates make up a significant part of the biomass in aquatic ecosystems and may cause perceptible alterations in the population dynamics of their hosts, studies on the extrinsic and intrinsic factors that control the abundance of these microorganisms are scarce in literature. In the present study, we investigated the colonization site and intensity of rhabdostylid epibiont upon chironomid larvae and assessed the influence of organic pollution and chironomid communities on the prevalence and abundance of epibiont ciliates at five sampling stations (two in rural areas and three in urban areas) along a neotropical urban stream over a period of 12 months. Among the 24 genera of chironomids found and the 31,976 larvae analyzed, 96.12% belonged to the Chironomus genus, of which 16.95% (5212) were colonized by Rhabdostyla aff. chironomi. The infestation intensity varied from one to 67 individuals per host with an average intensity of 4.86 (± 33.45). Ciliates were only found colonizing the chironomids' ventral tubules. The high number of chironomid larvae, high host- and site-specificity, low infestation intensity, and absence of apparent structural damage to hosts evidence an intimate relationship between epibiont and basibiont as well as a possibly long coevolutionary history. Both prevalence and abundance of epibiont ciliates were correlated to the pollution rate of the studied stream. There was an alteration in the composition and structure of the chironomid community along the sampling stations. Numeric dominance of Chironomus-tolerant chironomids and its direct correlation to infestation prevalence and to ciliates abundance highlights the predilection of both peritrich ciliates and Chironomus larvae for organically-enriched environments.


Asunto(s)
Chironomidae/fisiología , Cilióforos/fisiología , Animales , Brasil , Chironomidae/clasificación , Agua Dulce , Especificidad del Huésped , Larva/fisiología , Contaminantes Químicos del Agua
13.
Genome ; 61(11): 787-796, 2018 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-30365909

RESUMEN

Chironomid flies (non-biting midges) are among the most abundant and diverse animals in Arctic regions, but detailed analyses of species distributions and biogeographical patterns are hampered by challenging taxonomy and reliance on morphology for species-level identification. Here we take advantage of available DNA barcode data of Arctic Chironomidae in BOLD to analyse similarities in species distributions across a northern Nearctic - West Palearctic gradient. Using more than 260 000 barcodes representing 4666 BINs (Barcode Index Numbers) and 826 named species (some with interim names) from a combination of public and novel data, we show that the Greenland chironomid fauna shows affinities to both the Nearctic and the West Palearctic regions. While raw taxon counts indicate a strong Greenland - North American affinity, comparisons using Chao's dissimilarity metric support a slightly higher similarity between Greenland and West Palearctic chironomid communities. Results were relatively consistent across different definitions of species taxonomic units, including morphologically determined species, BINs, and superBINs based on a ∼4.5% threshold. While most taxa found in Greenland are shared with at least one other region, reflecting circum-Arctic dispersal, our results also reveal that Greenland harbours a small endemic biodiversity. Our exploratory study showcases how DNA barcoding efforts using standardized gene regions contribute to an understanding of broad-scale patterns in biogeography by enabling joint analysis of public DNA sequence data derived from diverse prior studies.


Asunto(s)
Chironomidae/clasificación , Código de Barras del ADN Taxonómico , Animales , Regiones Árticas , Biodiversidad , Chironomidae/genética , Femenino , Masculino , Filogeografía
14.
Rev. biol. trop ; 66(3): 1118-1134, jul.-sep. 2018. tab, graf
Artículo en Inglés | LILACS, SaludCR | ID: biblio-977371

RESUMEN

Abstract The family Chironomidae (Diptera) is the most widely distributed, most diverse, and often the most abundant of all families of benthic macroinvertebrates in aquatic ecosystems, including estuaries and other coastal marine ecosystems. Chironomid assemblages are likely to provide a useful measure of biotic integrity in estuaries of Costa Rica, which lack an intensive estuarine bioassessment tool to support environmental monitoring and regulatory programs. We characterized the taxonomic composition of Chironomidae, tested a Chironomidae Index of Biotic Integrity (CIBI) developed from extrinsic pollution tolerance values for its efficacy in evaluating the surface water quality and physical habitat, and made recommendations for increasing the sensitivity of the CIBI to detect differing degrees of stress across a range of estuaries in Costa Rica. Specifically, we selected nine estuaries within six different watersheds across a land use gradient located on the Caribbean coast of Costa Rica and collected Chironomidae surface-floating pupal exuviae (SFPE) samples biannually for two consecutive years (July 2012, Jan. 2013, July 2013, Jan. 2014). We identified 228 morphospecies and 70 genera from 17 071 Chironomidae pupal exuviae collected from nine estuaries, which ranked in the following order from lowest to highest biotic integrity based on CIBI scores: Estero Negro, Laguna Cuatro, Laguna Jalova, Laguna del Tortuguero, Río Parismina, Laguna Barra del Colorado, Río Pacuare, Río Bananito, and Río Estrella. The CIBI successfully differentiated between estuaries with poor versus good biotic integrity, indicating that CIBI could be used to evaluate the surface water quality and physical habitat of Costa Rican estuaries. We recommend that future studies refine our approach by developing regionally accurate genus and corresponding species-level tolerance values to improve the sensitivity of the CIBI for biological monitoring of Costa Rican estuaries. Rev. Biol. Trop. 66(3): 1118-1134. Epub 2018 September 01.


Resumen La familia Chironomidae (Diptera) es la más ampliamente distribuida, más diversa y a menudo, la más abundante de todas las familias de macroinvertebrados bentónicos en ecosistemas acuáticos, incluyendo estuarios y otros ecosistemas marinos. Probablemente, los ensambles de quironómidos proporcionen una medida útil de integridad biótica en estuarios de Costa Rica, los cuales carecen de una herramienta de evaluación biológica que respalde programas de monitoreo ambiental y programas regulatorios. Caracterizamos la composición taxonómica de Chironomidae, probamos un Índice de Integridad Biótica de Chironomidae (CIBI) desarrollado a partir de valores de tolerancia de contaminación extrínseca, por su eficacia en evaluar la calidad de la superficie del agua y el hábitat físico. Además, realizamos recomendaciones para incrementar la sensibilidad del CIBI para detectar diferentes grados de estrés en un rango de estuarios en Costa Rica. Específicamente, seleccionamos nueve estuarios dentro de seis cuencas diferentes a lo largo de un gradiente de uso de suelo en la costa Caribe de Costa Rica y recolectamos muestras de las exuvias pupales que flotan en la superficie (SFPE) por dos años consecutivos (Julio 2012, Enero 2013, Julio 2013, Enero 2014). Identificamos 228 morfoespecies y 70 géneros de 17 071 exuvias de pupas de Chironomidae recolectadas en nueve estuarios, los cuales se clasificaron en el siguiente orden de menor a mayor integridad biótica basado en los valores del CIBI: Estero Negro, Laguna Cuatro, Laguna Jalova, Laguna del Tortuguero, Río Parismina, Laguna Barra del Colorado, Río Pacuare, Río Bananito, y Río Estrella. El CIBI diferenció eficazmente entre estuarios con integridad biótica pobre versus buena, indicando que el CIBI puede ser usado para evaluar la calidad de la superficie del agua y el hábitat físico de estuarios de Costa Rica. Recomendamos que estudios futuros refinen nuestro planteamiento desarrollando valores de tolerancia de géneros precisos regionalmente y niveles correspondientes de especies para mejorar la sensibilidad del CIBI para el monitoreo de estuarios de Costa Rica.


Asunto(s)
Animales , Fauna Béntica/análisis , Chironomidae/clasificación , Chironomidae/fisiología , Ecosistema , Estuarios , Costa Rica , Biota
15.
Environ Pollut ; 242(Pt B): 1058-1066, 2018 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-30096544

RESUMEN

The lotic habitats affected by trout farm waste are colonized with a particular invertebrate community of which chironomids are the most abundant group. However, there is little information available regarding how chironomid community structures respond to this type of pollution at the highest taxonomic resolution. Eight fish farms, together with their lotic systems as recipients, were used to test the variability of the chironomid community and its surrogates (taxonomic and functional metrics) across spatially arranged sampling sites to form a gradual decrease in the trout farm influence. The self organizing map (SOM) classified six different types of chironomid communities which were characteristic for both the control and affected habitats. The species indicator analyses listed 32 taxa as positive indicators of water pollution. The SOM and Kruskal-Wallis test revealed that the pattern of chironomid community structure obtained was mainly driven by six environmental parameters (Altitude, conductivity, distance from the outlet, hardness, HN4-N, NO3-N). Categorical principal components analysis (CATPCA) derived three models for each type of biotic metric, in which for diversity-, taxonomy- and functional feeding group-based metrics, the first two dimensions explained 55.2%, 58.3% and 55.4%, of the total variance respectively for 315 sampling sites. According to this analysis, the total number of taxa (S), abundance and the Shannon-Wiener index (H') (as a diversity metric), as well as the proportion of Tanypodinae (as taxonomic group) and grazers/scraper (GRA) and gatherer collector (GAT)(as FFG metrics), were related to the outlet distance gradient, thus showing great potential to be used in the multimetric approach in bioassessment.


Asunto(s)
Chironomidae/clasificación , Explotaciones Pesqueras , Contaminación del Agua/análisis , Animales , Monitoreo del Ambiente/métodos , Trucha , Residuos
16.
Neotrop Entomol ; 47(2): 256-270, 2018 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-28905263

RESUMEN

The genus Oliveiriella (Chironomidae, Orthocladiinae) was erected by Wiedenbrug & Fittkau (1997). The adults have characteristic black spots on their wings and other characteristics similar to the genus Cricotopus. Pupal skins are very characteristic with strong short spines in the anal lobe instead of setae, while larvae are distinguishable by the long anal papillae and the intense blue color of their body. However, Andersen et al (2013) consider Oliveiriella as a subgenera of Cricotopus. In this paper, using the sequences of the cox1 gene, we conclude that Oliveiriella should be considered a subgenus within Cricotopus, confirming its status in Andersen et al (2013). Furthermore, we describe Cricotopus (Oliveiriella) rieradevallae Prat & Paggi sp. n. from the Saltana river (Ecuador). The adult males, females, and preimaginal stages of the two species of subgenus Oliveiriella known from South America Cricotopus (O.) almeidai n. comb. from Peru, Brazil, and Argentina and Cricotopus (O.) sanjavieri n. comb. from Argentina are compared with those of Cricotopus (O.) rieradevallae sp. n. from Ecuador. The differences allow the distinction of the three species. The cox1 gene reveals that at least three different undescribed species of the same subgenus are present in the high-altitude tropical Andes. The morphology of the available pupae and pupal exuviae reveals the presence of several morphotypes that are candidates to be described as new species. A key used to distinguish these pupal morphotypes is provided, including the three described species. Additionally, the distribution of the subgenus is discussed.


Asunto(s)
Altitud , Chironomidae/anatomía & histología , Chironomidae/clasificación , Filogenia , Ríos , Animales , Femenino , Larva , Masculino , Pupa , América del Sur , Alas de Animales
17.
Neotrop Entomol ; 47(5): 619-627, 2018 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-29032439

RESUMEN

This field ecological study, based on the chironomid pupal exuvial technique (CPET), is new for the Paraná River and proposes an efficient tool to be used in future ecological approaches and biomonitoring. Drifting of pupal exuviae in a river-floodplain system of the Middle Paraná River floodplain was represented by 34 Chironomidae taxa, being the characteristic association obtained from the CPET: Lopescladius, Onconeura, Paralauterborniella, Polypedilum, and Harnischia complex. Diversity, richness, dominance, total density, and density of dominant taxa were different between the longitudinal and lateral dimensions but not between hydrologic phases, with a greater diversity and richness in the main channel of the river and higher density and dominance in floodplain habitats. The species turnover is the dominant process in structuring studied assemblages in spatial and temporal analysis, increasing in the floodplain habitats and in low-water phase. The results obtained showed that drifting exuviae in the longitudinal axis were coming from different assemblages and environments of a wider area (regional), while exuviae recorded in the connections of the floodplain environments in the lateral dimension could reflect the local assemblages. We demonstrated the ecological value of CPET studies to interpret the attributes of Chironomidae assemblage in river-floodplain systems of large rivers in an integrated way.


Asunto(s)
Biodiversidad , Chironomidae/clasificación , Ecosistema , Ríos , Animales , Brasil , Densidad de Población , Pupa
18.
Gigascience ; 6(3): 1-8, 2017 03 01.
Artículo en Inglés | MEDLINE | ID: mdl-28327954

RESUMEN

Background: In the Antarctic, only two species of Chironomidae occur naturally-the wingless midge, Belgica antarctica , and the winged midge, Parochlus steinenii . B. antarctica is an extremophile with unusual adaptations. The larvae of B. antarctica are desiccation- and freeze-tolerant and the adults are wingless. Recently, the compact genome of B. antarctica was reported and it is the first Antarctic eukaryote to be sequenced. Although P. steinenii occurs naturally in the Antarctic with B. antarctica , the larvae of P. steinenii are cold-tolerant but not freeze-tolerant and the adults are winged. Differences in adaptations in the Antarctic midges are interesting in terms of evolutionary processes within an extreme environment. Herein, we provide the genome of another Antarctic midge to help elucidate the evolution of these species. Results: The draft genome of P. steinenii had a total size of 138 Mbp, comprising 9513 contigs with an N50 contig size of 34,110 bp, and a GC content of 32.2%. Overall, 13,468 genes were predicted using the MAKER annotation pipeline, and gene ontology classified 10,801 (80.2%) predicted genes to a function. Compared with the assembled genome architecture of B. antarctica , that of P. steinenii was approximately 50 Mbp longer with 6.2-fold more repeat sequences, whereas gene regions were as similarly compact as in B. antarctica . Conclusions: We present an annotated draft genome of the Antarctic midge, P. steinenii . The genomes of P. steinenii and B. antarctica will aid in the elucidation of evolution in harsh environments and provide new resources for functional genomic analyses of the order Diptera.


Asunto(s)
Adaptación Fisiológica/genética , Chironomidae/genética , Genoma de los Insectos/genética , Secuenciación Completa del Genoma/métodos , Animales , Regiones Antárticas , Chironomidae/clasificación , Frío , Evolución Molecular , Ontología de Genes , Proteínas de Insectos/genética , Larva/genética , Especificidad de la Especie
19.
Zootaxa ; 4208(1): zootaxa.4208.1.4, 2016 Dec 14.
Artículo en Inglés | MEDLINE | ID: mdl-27988539

RESUMEN

A new species of Dicrotendipes is described in all life stages from Florida. Adults of this new species are nearly identical to D. modestus (Say); pupae are similar to D. modestus, D. neomodestus (Malloch) and D. tritomus (Kieffer); while the larvae are unique and were keyed by Epler (1992, 1995, 2001) as Dicrotendipes sp. A. The taxonomic status of D. modestus and D. pulsus (Walker) is discussed.


Asunto(s)
Chironomidae/anatomía & histología , Chironomidae/clasificación , Animales , Chironomidae/crecimiento & desarrollo , Femenino , Florida , Larva/anatomía & histología , Masculino , Pupa/anatomía & histología , Especificidad de la Especie
20.
Zootaxa ; 4205(4): zootaxa.4205.4.1, 2016 Dec 07.
Artículo en Inglés | MEDLINE | ID: mdl-27988565

RESUMEN

Australian Cecidomyiidae described by Schiner (1868), Skuse (1888, 1890), Koebele (1893), Felt (1915), Edwards (1916) and Rübsaamen (1916), totalling 111 species and three subgenera, are revised. Chastomera Skuse, 1888 is confirmed to be a junior synonym of Haplusia Karsch, 1878 and Gonioclema Skuse, 1888 and Necrophlebia Skuse, 1888 are declared nomina dubia. Twenty-two species are placed to genus, an additional four species are placed to supertribe or subfamily, all of them redescribed. The remaining species are declared junior synonyms or nomina dubia. Diadiplosis koebelei (Koebele, 1893) is a new junior synonym of Diadiplosis plumbea (Skuse, 1888). Dasineura tomentosa Dorchin, 2011 is a new junior synonym of Dasineura frauenfeldi (Schiner, 1868). Sphenolasioptera Kolesik & Gagné gen. nov. (Cecidomyiinae: Lasiopterini) is erected to contain Sphenolasioptera vastatrix (Skuse, 1888) n. comb. The following genera are recorded from Australia for the first time: Ledomyia Kieffer (Cecidomyiinae: Ledomyiini), represented by L. vitulans (Skuse), n. comb.; Bremia Rondani (Cecidomyiinae: Aphidoletini), represented by B. actiosa (Skuse) n. comb. and B. oreas (Skuse) n. comb.; Divellepidosis Fedotova & Sidorenko (Porricondylinae: Porricondylini), represented by D. pallidina (Skuse) n. comb. and D. indubitata (Skuse) n. comb. Additions are made to the key to genera of Cecidomyiinae of Australia and Papua New Guinea (Kolesik 2014) to accomodate Bremia, Ledomyia and Sphenolasioptera.


Asunto(s)
Chironomidae/clasificación , Distribución Animal , Estructuras Animales/anatomía & histología , Estructuras Animales/crecimiento & desarrollo , Animales , Australia , Tamaño Corporal , Chironomidae/anatomía & histología , Chironomidae/crecimiento & desarrollo , Ecosistema , Femenino , Masculino , Tamaño de los Órganos
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